General Information of This Drug
Drug ID DRG00396
Drug Name 5-Amino-2-Methyl-N-[(1r)-1-Naphthalen-1-Ylethyl]benzamide
Synonyms
GRL0617; 1093070-16-6; GRL-0617; 5-Amino-2-Methyl-N-[(1r)-1-Naphthalen-1-Ylethyl]benzamide; SQH4947NDN; 5-Amino-2-methyl-N-(1R-naphthalen-1-yl-ethyl)-benzamide; UNII-SQH4947NDN; (-)-GRL-0617; GRL 0617; 5-Amino-2-methyl-N-((1R)-1-(1-naphthalenyl)ethyl)benzamide; 5-Amino-2-methyl-N-[(1R)-1-(1-naphthalenyl)ethyl]benzamide; 5-amino-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide; Benzamide, 5-amino-2-methyl-N-((1R)-1-(1-naphthalenyl)ethyl)-; 5-Amino-2-methyl-N-[(R)-1-(1-naphthyl)ethyl]benzamide; (R)-5-amino-2-methyl-N-(1-(naphthalen-1-yl)ethyl)benzamide; CHEMBL549695; SCHEMBL1319181; BDBM31524; GTPL11078; DTXSID10660795; CHEBI:167176; UVERBUNNCOKGNZ-CQSZACIVSA-N; EX-A4032; s6845; AKOS015840255; AKOS015924263; DB08656; compound 25 [PMID: 19645480]; NCGC00188640-01; AC-36473; BS-48457; Naphthalene and Benzamide Derivative, 25; HY-117043; CS-0063568; NS00072489; E73459; Q27097846; 5-Amino-2-methyl-N-[2-(naphthalen-1-yl)ethyl]benzamide
   Click to Show/Hide
Structure
Formula
C20H20N2O
#Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 304.4
Lipid-water partition coefficient (xlogp) 4
Hydrogen Bond Donor Count (hbonddonor) 2
Hydrogen Bond Acceptor Count (hbondacc) 2
Rotatable Bond Count (rotbonds) 3
PubChem CID
24941262
Canonical smiles
CC1=C(C=C(C=C1)N)C(=O)NC(C)C2=CC=CC3=CC=CC=C32
InChI
InChI=1S/C20H20N2O/c1-13-10-11-16(21)12-19(13)20(23)22-14(2)17-9-5-7-15-6-3-4-8-18(15)17/h3-12,14H,21H2,1-2H3,(H,22,23)/t14-/m1/s1
InChIKey
UVERBUNNCOKGNZ-CQSZACIVSA-N
IUPAC Name
5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide
Full Information of The Activity Data of The PDC(s) Related to This Drug
Ac-EMC [Investigative]
Revealed Based on the Cell Line Data
Click To Hide/Show 2 Activity Data Related to This Level
Experiment 1 Reporting the Activity Data of This PDC [1]
Indication SARS-CoV infection
Efficacy Data Half maximal inhibitory concentration (IC50) 3.43 ± 0.54 μM
MOA of PDC
Peptide-drug conjugates (PDCs) are a class of novel molecules widely designed and synthesized for delivering drug payloads. In this work, we designed a novel PDC in which the GRL0617 was linked to the sulfonium-tethered peptides derived from PLpro-specific substrate LRGG. This conjugate could covalently label PLpro active site C111. Two conjugates EM-C and EC-M showed a promising in vitro IC50 of 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Both conjugates could effectively inhibit anti-ISGylation activities of PLpro in cells, and there is low toxicity of PDC EC-M and EM-C in different cells.

   Click to Show/Hide
Description
The enzymatic activities of SARS-CoV-2 PLpro were tested using the fluorogenic peptide substrate LRGG-AMC. The sulfonium-tethered peptides without GRL0617 could not efficiently inhibit SARS-CoV-2 PLpro, while the sulfonium-tethered peptide conjugate GRL0617 has a better inhibition ability. Specifically, IC50 values of EM-C and EC-M were 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Enzymatic activities of PLpro were inhibited by different PDCs or GRL0617. (A) Enzymatic activity of SARS-CoV-2 PLpro was inhibited by different PDCs or GRL0617. The activity assay was performed using the peptide LRGG-ACC as a substrate. Error bars represent standard errors of mean of at least three independent measurements. (B) IC50 of different PDCs or GRL0617 in SARS-CoV-2 PLpro. IC50 of EM-C was 7.40 ± 0.37 μM. IC50 of EC-M was 8.63 ± 0.55 μM. IC50 of ELRGG was 15.38 ± 1.63 μM. IC50 of GRL0617 was 2.64 ± 0.34 μM. (C) Enzymatic activity of SARS-CoV PLpro was inhibited by different PDCs or GRL0617. (D) Enzyme activity of MERS PLpro was inhibited by different PDCs or GRL0617. Also, we tested the peptide inhibition ability to SARS-CoV PLpro and MERS PLpro. There is a high sequence identity (83%) between the SARS-CoV-2 PLpro and SARS-CoV PLpro. The IC50 value of EM-C against SARS-CoV PLpro was 3.43 ± 0.54 μM, close to GRL0617 (IC50 = 2.60 ± 0.05 μM). Its linear analogue showed weaker inhibition. The GRL0617, EC-M, EM-C, and ELRGG could not inhibit MERS PLpro. Both EM-C and EC-M showed better inhibition for SARS-CoV PLpro than SARS-CoV-2 PLpro.

   Click to Show/Hide
In Vitro Model COVID-19 SARS-CoV-2 2697049
Experiment 2 Reporting the Activity Data of This PDC [1]
Indication SARS-CoV infection
Efficacy Data Half maximal inhibitory concentration (IC50) 7.40±0.37 μM
MOA of PDC
Peptide-drug conjugates (PDCs) are a class of novel molecules widely designed and synthesized for delivering drug payloads. In this work, we designed a novel PDC in which the GRL0617 was linked to the sulfonium-tethered peptides derived from PLpro-specific substrate LRGG. This conjugate could covalently label PLpro active site C111. Two conjugates EM-C and EC-M showed a promising in vitro IC50 of 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Both conjugates could effectively inhibit anti-ISGylation activities of PLpro in cells, and there is low toxicity of PDC EC-M and EM-C in different cells.

   Click to Show/Hide
Description
The enzymatic activities of SARS-CoV-2 PLpro were tested using the fluorogenic peptide substrate LRGG-AMC. The sulfonium-tethered peptides without GRL0617 could not efficiently inhibit SARS-CoV-2 PLpro, while the sulfonium-tethered peptide conjugate GRL0617 has a better inhibition ability. Specifically, IC50 values of EM-C and EC-M were 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Enzymatic activities of PLpro were inhibited by different PDCs or GRL0617. (A) Enzymatic activity of SARS-CoV-2 PLpro was inhibited by different PDCs or GRL0617. The activity assay was performed using the peptide LRGG-ACC as a substrate. Error bars represent standard errors of mean of at least three independent measurements. (B) IC50 of different PDCs or GRL0617 in SARS-CoV-2 PLpro. IC50 of EM-C was 7.40 ± 0.37 μM. IC50 of EC-M was 8.63 ± 0.55 μM. IC50 of ELRGG was 15.38 ± 1.63 μM. IC50 of GRL0617 was 2.64 ± 0.34 μM. (C) Enzymatic activity of SARS-CoV PLpro was inhibited by different PDCs or GRL0617. (D) Enzyme activity of MERS PLpro was inhibited by different PDCs or GRL0617. Also, we tested the peptide inhibition ability to SARS-CoV PLpro and MERS PLpro. There is a high sequence identity (83%) between the SARS-CoV-2 PLpro and SARS-CoV PLpro. The IC50 value of EM-C against SARS-CoV PLpro was 3.43 ± 0.54 μM, close to GRL0617 (IC50 = 2.60 ± 0.05 μM). Its linear analogue showed weaker inhibition. The GRL0617, EC-M, EM-C, and ELRGG could not inhibit MERS PLpro. Both EM-C and EC-M showed better inhibition for SARS-CoV PLpro than SARS-CoV-2 PLpro.

   Click to Show/Hide
In Vitro Model COVID-19 SARS-CoV-2 2697049
Ac-ECM [Investigative]
Revealed Based on the Cell Line Data
Click To Hide/Show 2 Activity Data Related to This Level
Experiment 1 Reporting the Activity Data of This PDC [1]
Indication SARS-CoV infection
Efficacy Data Half maximal inhibitory concentration (IC50) 8.63 ± 0.55 μM
MOA of PDC
Peptide-drug conjugates (PDCs) are a class of novel molecules widely designed and synthesized for delivering drug payloads. In this work, we designed a novel PDC in which the GRL0617 was linked to the sulfonium-tethered peptides derived from PLpro-specific substrate LRGG. This conjugate could covalently label PLpro active site C111. Two conjugates EM-C and EC-M showed a promising in vitro IC50 of 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Both conjugates could effectively inhibit anti-ISGylation activities of PLpro in cells, and there is low toxicity of PDC EC-M and EM-C in different cells.

   Click to Show/Hide
Description
The enzymatic activities of SARS-CoV-2 PLpro were tested using the fluorogenic peptide substrate LRGG-AMC. The sulfonium-tethered peptides without GRL0617 could not efficiently inhibit SARS-CoV-2 PLpro, while the sulfonium-tethered peptide conjugate GRL0617 has a better inhibition ability. Specifically, IC50 values of EM-C and EC-M were 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Enzymatic activities of PLpro were inhibited by different PDCs or GRL0617. (A) Enzymatic activity of SARS-CoV-2 PLpro was inhibited by different PDCs or GRL0617. The activity assay was performed using the peptide LRGG-ACC as a substrate. Error bars represent standard errors of mean of at least three independent measurements. (B) IC50 of different PDCs or GRL0617 in SARS-CoV-2 PLpro. IC50 of EM-C was 7.40 ± 0.37 μM. IC50 of EC-M was 8.63 ± 0.55 μM. IC50 of ELRGG was 15.38 ± 1.63 μM. IC50 of GRL0617 was 2.64 ± 0.34 μM. (C) Enzymatic activity of SARS-CoV PLpro was inhibited by different PDCs or GRL0617. (D) Enzyme activity of MERS PLpro was inhibited by different PDCs or GRL0617. Also, we tested the peptide inhibition ability to SARS-CoV PLpro and MERS PLpro. There is a high sequence identity (83%) between the SARS-CoV-2 PLpro and SARS-CoV PLpro. The IC50 value of EM-C against SARS-CoV PLpro was 3.43 ± 0.54 μM, close to GRL0617 (IC50 = 2.60 ± 0.05 μM). Its linear analogue showed weaker inhibition. The GRL0617, EC-M, EM-C, and ELRGG could not inhibit MERS PLpro. Both EM-C and EC-M showed better inhibition for SARS-CoV PLpro than SARS-CoV-2 PLpro.

   Click to Show/Hide
In Vitro Model COVID-19 SARS-CoV-2 2697049
Experiment 2 Reporting the Activity Data of This PDC [1]
Indication SARS-CoV infection
Efficacy Data Half maximal inhibitory concentration (IC50) 16.38±0.81 μM
MOA of PDC
Peptide-drug conjugates (PDCs) are a class of novel molecules widely designed and synthesized for delivering drug payloads. In this work, we designed a novel PDC in which the GRL0617 was linked to the sulfonium-tethered peptides derived from PLpro-specific substrate LRGG. This conjugate could covalently label PLpro active site C111. Two conjugates EM-C and EC-M showed a promising in vitro IC50 of 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Both conjugates could effectively inhibit anti-ISGylation activities of PLpro in cells, and there is low toxicity of PDC EC-M and EM-C in different cells.

   Click to Show/Hide
Description
The enzymatic activities of SARS-CoV-2 PLpro were tested using the fluorogenic peptide substrate LRGG-AMC. The sulfonium-tethered peptides without GRL0617 could not efficiently inhibit SARS-CoV-2 PLpro, while the sulfonium-tethered peptide conjugate GRL0617 has a better inhibition ability. Specifically, IC50 values of EM-C and EC-M were 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Enzymatic activities of PLpro were inhibited by different PDCs or GRL0617. (A) Enzymatic activity of SARS-CoV-2 PLpro was inhibited by different PDCs or GRL0617. The activity assay was performed using the peptide LRGG-ACC as a substrate. Error bars represent standard errors of mean of at least three independent measurements. (B) IC50 of different PDCs or GRL0617 in SARS-CoV-2 PLpro. IC50 of EM-C was 7.40 ± 0.37 μM. IC50 of EC-M was 8.63 ± 0.55 μM. IC50 of ELRGG was 15.38 ± 1.63 μM. IC50 of GRL0617 was 2.64 ± 0.34 μM. (C) Enzymatic activity of SARS-CoV PLpro was inhibited by different PDCs or GRL0617. (D) Enzyme activity of MERS PLpro was inhibited by different PDCs or GRL0617. Also, we tested the peptide inhibition ability to SARS-CoV PLpro and MERS PLpro. There is a high sequence identity (83%) between the SARS-CoV-2 PLpro and SARS-CoV PLpro. The IC50 value of EM-C against SARS-CoV PLpro was 3.43 ± 0.54 μM, close to GRL0617 (IC50 = 2.60 ± 0.05 μM). Its linear analogue showed weaker inhibition. The GRL0617, EC-M, EM-C, and ELRGG could not inhibit MERS PLpro. Both EM-C and EC-M showed better inhibition for SARS-CoV PLpro than SARS-CoV-2 PLpro.

   Click to Show/Hide
In Vitro Model COVID-19 SARS-CoV-2 2697049
Ac-ELRGG [Investigative]
Revealed Based on the Cell Line Data
Click To Hide/Show 2 Activity Data Related to This Level
Experiment 1 Reporting the Activity Data of This PDC [1]
Indication SARS-CoV infection
Efficacy Data Half maximal inhibitory concentration (IC50) 15.38±1.63 μM
MOA of PDC
Peptide-drug conjugates (PDCs) are a class of novel molecules widely designed and synthesized for delivering drug payloads. In this work, we designed a novel PDC in which the GRL0617 was linked to the sulfonium-tethered peptides derived from PLpro-specific substrate LRGG. This conjugate could covalently label PLpro active site C111. Two conjugates EM-C and EC-M showed a promising in vitro IC50 of 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Both conjugates could effectively inhibit anti-ISGylation activities of PLpro in cells, and there is low toxicity of PDC EC-M and EM-C in different cells.

   Click to Show/Hide
Description
The enzymatic activities of SARS-CoV-2 PLpro were tested using the fluorogenic peptide substrate LRGG-AMC. The sulfonium-tethered peptides without GRL0617 could not efficiently inhibit SARS-CoV-2 PLpro, while the sulfonium-tethered peptide conjugate GRL0617 has a better inhibition ability. Specifically, IC50 values of EM-C and EC-M were 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Enzymatic activities of PLpro were inhibited by different PDCs or GRL0617. (A) Enzymatic activity of SARS-CoV-2 PLpro was inhibited by different PDCs or GRL0617. The activity assay was performed using the peptide LRGG-ACC as a substrate. Error bars represent standard errors of mean of at least three independent measurements. (B) IC50 of different PDCs or GRL0617 in SARS-CoV-2 PLpro. IC50 of EM-C was 7.40 ± 0.37 μM. IC50 of EC-M was 8.63 ± 0.55 μM. IC50 of ELRGG was 15.38 ± 1.63 μM. IC50 of GRL0617 was 2.64 ± 0.34 μM. (C) Enzymatic activity of SARS-CoV PLpro was inhibited by different PDCs or GRL0617. (D) Enzyme activity of MERS PLpro was inhibited by different PDCs or GRL0617. Also, we tested the peptide inhibition ability to SARS-CoV PLpro and MERS PLpro. There is a high sequence identity (83%) between the SARS-CoV-2 PLpro and SARS-CoV PLpro. The IC50 value of EM-C against SARS-CoV PLpro was 3.43 ± 0.54 μM, close to GRL0617 (IC50 = 2.60 ± 0.05 μM). Its linear analogue showed weaker inhibition. The GRL0617, EC-M, EM-C, and ELRGG could not inhibit MERS PLpro. Both EM-C and EC-M showed better inhibition for SARS-CoV PLpro than SARS-CoV-2 PLpro.

   Click to Show/Hide
In Vitro Model COVID-19 SARS-CoV-2 2697049
Experiment 2 Reporting the Activity Data of This PDC [1]
Indication SARS-CoV infection
Efficacy Data Half maximal inhibitory concentration (IC50) 31.75 ±1.55 μM
MOA of PDC
Peptide-drug conjugates (PDCs) are a class of novel molecules widely designed and synthesized for delivering drug payloads. In this work, we designed a novel PDC in which the GRL0617 was linked to the sulfonium-tethered peptides derived from PLpro-specific substrate LRGG. This conjugate could covalently label PLpro active site C111. Two conjugates EM-C and EC-M showed a promising in vitro IC50 of 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Both conjugates could effectively inhibit anti-ISGylation activities of PLpro in cells, and there is low toxicity of PDC EC-M and EM-C in different cells.

   Click to Show/Hide
Description
The enzymatic activities of SARS-CoV-2 PLpro were tested using the fluorogenic peptide substrate LRGG-AMC. The sulfonium-tethered peptides without GRL0617 could not efficiently inhibit SARS-CoV-2 PLpro, while the sulfonium-tethered peptide conjugate GRL0617 has a better inhibition ability. Specifically, IC50 values of EM-C and EC-M were 7.40 ± 0.37 and 8.63 ± 0.55 μM, respectively. Enzymatic activities of PLpro were inhibited by different PDCs or GRL0617. (A) Enzymatic activity of SARS-CoV-2 PLpro was inhibited by different PDCs or GRL0617. The activity assay was performed using the peptide LRGG-ACC as a substrate. Error bars represent standard errors of mean of at least three independent measurements. (B) IC50 of different PDCs or GRL0617 in SARS-CoV-2 PLpro. IC50 of EM-C was 7.40 ± 0.37 μM. IC50 of EC-M was 8.63 ± 0.55 μM. IC50 of ELRGG was 15.38 ± 1.63 μM. IC50 of GRL0617 was 2.64 ± 0.34 μM. (C) Enzymatic activity of SARS-CoV PLpro was inhibited by different PDCs or GRL0617. (D) Enzyme activity of MERS PLpro was inhibited by different PDCs or GRL0617. Also, we tested the peptide inhibition ability to SARS-CoV PLpro and MERS PLpro. There is a high sequence identity (83%) between the SARS-CoV-2 PLpro and SARS-CoV PLpro. The IC50 value of EM-C against SARS-CoV PLpro was 3.43 ± 0.54 μM, close to GRL0617 (IC50 = 2.60 ± 0.05 μM). Its linear analogue showed weaker inhibition. The GRL0617, EC-M, EM-C, and ELRGG could not inhibit MERS PLpro. Both EM-C and EC-M showed better inhibition for SARS-CoV PLpro than SARS-CoV-2 PLpro.

   Click to Show/Hide
In Vitro Model COVID-19 SARS-CoV-2 2697049
References
Ref 1 Design and Evaluation of a Novel Peptide-Drug Conjugate Covalently Targeting SARS-CoV-2 Papain-like Protease. J Med Chem. 2022 Jan 13;65(1):876-884. doi: 10.1021/acs.jmedchem.1c02022. Epub 2022 Jan 4.