General Information of This Peptide
Peptide ID
PEP00019
Peptide Name
Cyclic NGR 2
Structure
Sequence
CNGRCGG
Peptide Type
Cyclic
Receptor Name
Aminopeptidase N (ANPEP)
 Receptor Info 
PDC Transmembrane Types Cell targeting peptides (CTPs)
Formula
C22H37N11O9S2
Isosmiles
[H]NC(=O)C[C@@H]1NC(=O)[C@@H](N)CSSC[C@@H](C(=O)NCC(=O)NCC(=O)O)NC(=O)[C@H](CCC/N=C(\N)N[H])NC(=O)CNC1=O
InChI
InChI=1S/C22H37N11O9S2/c23-10-8-43-44-9-13(20(41)29-5-15(35)28-7-17(37)38)33-21(42)11(2-1-3-27-22(25)26)31-16(36)6-30-19(40)12(4-14(24)34)32-18(10)39/h10-13H,1-9,23H2,(H2,24,34)(H,28,35)(H,29,41)(H,30,40)(H,31,36)(H,32,39)(H,33,42)(H,37,38)(H4,25,26,27)/t10-,11-,12-,13-/m0/s1
InChIKey
KNYSVOJCCYZLQP-CYDGBPFRSA-N
Pharmaceutical Properties
Molecule Weight
663.74
Polar area
345.41
Complexity
663.2217138
xlogp Value
-6.4747
Heavy Count
44
Rot Bonds
11
Hbond acc
12
Hbond Donor
11
Each Peptide-drug Conjugate Related to This Peptide
Full Information of The Activity Data of The PDC(s) Related to This Peptide
Cyclic NGR peptidedaunomycin conjugates 2 [Investigative]
Revealed Based on the Cell Line Data
Click To Hide/Show 4 Activity Data Related to This Level
Experiment 1 Reporting the Activity Data of This PDC [1]
Indication Tumor
Efficacy Data Half Maximal Inhibitory Concentration (IC50)
2.0 ± 0.3 µM
Administration Time 72 h
Description
In contrast, conjugate 2 (containing a disulfide bridge) showed preferential toxicity to HT-1080 cells in the cytostatic experiments, resulting in the highest selectivity. The antitumor effect of 2 increased in time (72 h treatment), but its selectivity decreased significantly. In comparison to conjugates 3 (thioether linkage) and 5 (amide bond), both containing free Lys in the cycle, conjugate 5 had slightly better activity against HT-1080 cells. However, the selectivity of conjugate 5 to CD13 receptors (as judged by the relative toxicity against the two cell lines) was not significant after 6 h treatment, whereas it was significantly more toxic to HT-1080 cells in the 72 h experiment. This can also be explained by its higher chemostability that results in longer exposure the cells to the unmodified NGR peptide-drug conjugate. In contrast, their analogs in which the drug molecule is connected to the side chain of Lys in the cycle (conjugates 4 and 6) were more specific but less toxic, especially in the cytotoxicity experiments. Interestingly, there was no correlation between the specificity and the chemostability of the conjugates.

   Click to Show/Hide
In Vitro Model Fibrosarcoma HT-1080 cell CVCL_0317
Experiment 2 Reporting the Activity Data of This PDC [1]
Indication Tumor
Efficacy Data Half Maximal Inhibitory Concentration (IC50)
3.3 ± 0.9 µM
Administration Time 72 h
Description
In contrast, conjugate 2 (containing a disulfide bridge) showed preferential toxicity to HT-1080 cells in the cytostatic experiments, resulting in the highest selectivity. The antitumor effect of 2 increased in time (72 h treatment), but its selectivity decreased significantly. In comparison to conjugates 3 (thioether linkage) and 5 (amide bond), both containing free Lys in the cycle, conjugate 5 had slightly better activity against HT-1080 cells. However, the selectivity of conjugate 5 to CD13 receptors (as judged by the relative toxicity against the two cell lines) was not significant after 6 h treatment, whereas it was significantly more toxic to HT-1080 cells in the 72 h experiment. This can also be explained by its higher chemostability that results in longer exposure the cells to the unmodified NGR peptide-drug conjugate. In contrast, their analogs in which the drug molecule is connected to the side chain of Lys in the cycle (conjugates 4 and 6) were more specific but less toxic, especially in the cytotoxicity experiments. Interestingly, there was no correlation between the specificity and the chemostability of the conjugates.

   Click to Show/Hide
In Vitro Model Colon adenocarcinoma CD13-negative HT29 cell CVCL_0320
Experiment 3 Reporting the Activity Data of This PDC [1]
Indication Tumor
Efficacy Data Half Maximal Inhibitory Concentration (IC50)
6.8 ± 0.7 µM
Administration Time 6 h
Description
In contrast, conjugate 2 (containing a disulfide bridge) showed preferential toxicity to HT-1080 cells in the cytostatic experiments, resulting in the highest selectivity. The antitumor effect of 2 increased in time (72 h treatment), but its selectivity decreased significantly. In comparison to conjugates 3 (thioether linkage) and 5 (amide bond), both containing free Lys in the cycle, conjugate 5 had slightly better activity against HT-1080 cells. However, the selectivity of conjugate 5 to CD13 receptors (as judged by the relative toxicity against the two cell lines) was not significant after 6 h treatment, whereas it was significantly more toxic to HT-1080 cells in the 72 h experiment. This can also be explained by its higher chemostability that results in longer exposure the cells to the unmodified NGR peptide-drug conjugate. In contrast, their analogs in which the drug molecule is connected to the side chain of Lys in the cycle (conjugates 4 and 6) were more specific but less toxic, especially in the cytotoxicity experiments. Interestingly, there was no correlation between the specificity and the chemostability of the conjugates.

   Click to Show/Hide
In Vitro Model Fibrosarcoma HT-1080 cell CVCL_0317
Experiment 4 Reporting the Activity Data of This PDC [1]
Indication Tumor
Efficacy Data Half Maximal Inhibitory Concentration (IC50)
19.0 ± 1.4 µM
Administration Time 6 h
Description
In contrast, conjugate 2 (containing a disulfide bridge) showed preferential toxicity to HT-1080 cells in the cytostatic experiments, resulting in the highest selectivity. The antitumor effect of 2 increased in time (72 h treatment), but its selectivity decreased significantly. In comparison to conjugates 3 (thioether linkage) and 5 (amide bond), both containing free Lys in the cycle, conjugate 5 had slightly better activity against HT-1080 cells. However, the selectivity of conjugate 5 to CD13 receptors (as judged by the relative toxicity against the two cell lines) was not significant after 6 h treatment, whereas it was significantly more toxic to HT-1080 cells in the 72 h experiment. This can also be explained by its higher chemostability that results in longer exposure the cells to the unmodified NGR peptide-drug conjugate. In contrast, their analogs in which the drug molecule is connected to the side chain of Lys in the cycle (conjugates 4 and 6) were more specific but less toxic, especially in the cytotoxicity experiments. Interestingly, there was no correlation between the specificity and the chemostability of the conjugates.

   Click to Show/Hide
In Vitro Model Colon adenocarcinoma CD13-negative HT29 cell CVCL_0320
References
Ref 1 NGR-peptide-drug conjugates with dual targeting properties. PLoS One. 2017 Jun 2;12(6):e0178632. doi: 10.1371/journal.pone.0178632. eCollection 2017.