General Information of This Peptide
Peptide ID
PEP00072
Peptide Name
Cyclic NGR 4
Structure
Sequence
KNGRC
Peptide Type
Cyclic
Receptor Name
Aminopeptidase N (ANPEP)
 Receptor Info 
PDC Transmembrane Types Cell targeting peptides (CTPs)
Formula
C23H41N11O7S
Isosmiles
[H]NCCCC[C@@H]1NC(=O)CSC[C@@H](C(N)=O)NC(=O)[C@H](CCC/N=C(\N)N[H])NC(=O)CNC(=O)[C@H](CC(=O)N[H])NC1=O
InChI
InChI=1S/C23H41N11O7S/c24-6-2-1-4-12-21(40)33-14(8-16(25)35)20(39)30-9-17(36)31-13(5-3-7-29-23(27)28)22(41)34-15(19(26)38)10-42-11-18(37)32-12/h12-15H,1-11,24H2,(H2,25,35)(H2,26,38)(H,30,39)(H,31,36)(H,32,37)(H,33,40)(H,34,41)(H4,27,28,29)/t12-,13-,14-,15-/m0/s1
InChIKey
BKDZZBGCOVCALG-AJNGGQMLSA-N
Pharmaceutical Properties
Molecule Weight
615.718
Polar area
322.1
Complexity
615.2911137
xlogp Value
-5.6681
Heavy Count
42
Rot Bonds
12
Hbond acc
10
Hbond Donor
10
Each Peptide-drug Conjugate Related to This Peptide
Full Information of The Activity Data of The PDC(s) Related to This Peptide
Cyclic NGR peptidedaunomycin conjugates 4 [Investigative]
Revealed Based on the Cell Line Data
Click To Hide/Show 4 Activity Data Related to This Level
Experiment 1 Reporting the Activity Data of This PDC [1]
Indication Tumor
Efficacy Data Half Maximal Inhibitory Concentration (IC50)
14.5 ± 2.0 µM
Administration Time 72 h
Description
In contrast, conjugate 2 (containing a disulfide bridge) showed preferential toxicity to HT-1080 cells in the cytostatic experiments, resulting in the highest selectivity. The antitumor effect of 2 increased in time (72 h treatment), but its selectivity decreased significantly. In comparison to conjugates 3 (thioether linkage) and 5 (amide bond), both containing free Lys in the cycle, conjugate 5 had slightly better activity against HT-1080 cells. However, the selectivity of conjugate 5 to CD13 receptors (as judged by the relative toxicity against the two cell lines) was not significant after 6 h treatment, whereas it was significantly more toxic to HT-1080 cells in the 72 h experiment. This can also be explained by its higher chemostability that results in longer exposure the cells to the unmodified NGR peptide-drug conjugate. In contrast, their analogs in which the drug molecule is connected to the side chain of Lys in the cycle (conjugates 4 and 6) were more specific but less toxic, especially in the cytotoxicity experiments. Interestingly, there was no correlation between the specificity and the chemostability of the conjugates.

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In Vitro Model Fibrosarcoma HT-1080 cell CVCL_0317
Experiment 2 Reporting the Activity Data of This PDC [1]
Indication Tumor
Efficacy Data Half Maximal Inhibitory Concentration (IC50)
45.2 ± 13.2 µM
Administration Time 6 h
Description
In contrast, conjugate 2 (containing a disulfide bridge) showed preferential toxicity to HT-1080 cells in the cytostatic experiments, resulting in the highest selectivity. The antitumor effect of 2 increased in time (72 h treatment), but its selectivity decreased significantly. In comparison to conjugates 3 (thioether linkage) and 5 (amide bond), both containing free Lys in the cycle, conjugate 5 had slightly better activity against HT-1080 cells. However, the selectivity of conjugate 5 to CD13 receptors (as judged by the relative toxicity against the two cell lines) was not significant after 6 h treatment, whereas it was significantly more toxic to HT-1080 cells in the 72 h experiment. This can also be explained by its higher chemostability that results in longer exposure the cells to the unmodified NGR peptide-drug conjugate. In contrast, their analogs in which the drug molecule is connected to the side chain of Lys in the cycle (conjugates 4 and 6) were more specific but less toxic, especially in the cytotoxicity experiments. Interestingly, there was no correlation between the specificity and the chemostability of the conjugates.

   Click to Show/Hide
In Vitro Model Fibrosarcoma HT-1080 cell CVCL_0317
Experiment 3 Reporting the Activity Data of This PDC [1]
Indication Tumor
Efficacy Data Half Maximal Inhibitory Concentration (IC50) » 50 µM
Administration Time 6 h
Description
In contrast, conjugate 2 (containing a disulfide bridge) showed preferential toxicity to HT-1080 cells in the cytostatic experiments, resulting in the highest selectivity. The antitumor effect of 2 increased in time (72 h treatment), but its selectivity decreased significantly. In comparison to conjugates 3 (thioether linkage) and 5 (amide bond), both containing free Lys in the cycle, conjugate 5 had slightly better activity against HT-1080 cells. However, the selectivity of conjugate 5 to CD13 receptors (as judged by the relative toxicity against the two cell lines) was not significant after 6 h treatment, whereas it was significantly more toxic to HT-1080 cells in the 72 h experiment. This can also be explained by its higher chemostability that results in longer exposure the cells to the unmodified NGR peptide-drug conjugate. In contrast, their analogs in which the drug molecule is connected to the side chain of Lys in the cycle (conjugates 4 and 6) were more specific but less toxic, especially in the cytotoxicity experiments. Interestingly, there was no correlation between the specificity and the chemostability of the conjugates.

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In Vitro Model Colon adenocarcinoma CD13-negative HT29 cell CVCL_0320
Experiment 4 Reporting the Activity Data of This PDC [1]
Indication Tumor
Efficacy Data Half Maximal Inhibitory Concentration (IC50) » 50 µM
Administration Time 72 h
Description
In contrast, conjugate 2 (containing a disulfide bridge) showed preferential toxicity to HT-1080 cells in the cytostatic experiments, resulting in the highest selectivity. The antitumor effect of 2 increased in time (72 h treatment), but its selectivity decreased significantly. In comparison to conjugates 3 (thioether linkage) and 5 (amide bond), both containing free Lys in the cycle, conjugate 5 had slightly better activity against HT-1080 cells. However, the selectivity of conjugate 5 to CD13 receptors (as judged by the relative toxicity against the two cell lines) was not significant after 6 h treatment, whereas it was significantly more toxic to HT-1080 cells in the 72 h experiment. This can also be explained by its higher chemostability that results in longer exposure the cells to the unmodified NGR peptide-drug conjugate. In contrast, their analogs in which the drug molecule is connected to the side chain of Lys in the cycle (conjugates 4 and 6) were more specific but less toxic, especially in the cytotoxicity experiments. Interestingly, there was no correlation between the specificity and the chemostability of the conjugates.

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In Vitro Model Colon adenocarcinoma CD13-negative HT29 cell CVCL_0320
References
Ref 1 NGR-peptide-drug conjugates with dual targeting properties. PLoS One. 2017 Jun 2;12(6):e0178632. doi: 10.1371/journal.pone.0178632. eCollection 2017.